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Computer Methods and Programs in Biomedicine

Elsevier BV

Preprints posted in the last 7 days, ranked by how well they match Computer Methods and Programs in Biomedicine's content profile, based on 12 papers previously published here. The average preprint has a 0.06% match score for this journal, so anything above that is already an above-average fit.

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DIA-PINN. A physics-informed machine learning method to estimate global intrinsic diastolic chamber properties of the left ventricle from pressure-volume data

Fernandez Topham, J.; Guerrero Hurtado, M.; del Alamo, J. C.; Bermejo, J.; Martinez Legazpi, P.

2026-03-06 cardiovascular medicine 10.64898/2026.03.02.26347245
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Background: Pressure volume (PV) loop analysis remains the gold standard for assessing the intrinsic global diastolic properties of the left ventricle (LV). Traditional fitting techniques rely on local, phase-constrained fittings and are limited due to their sensitivity to noise, landmark selection, violation of assumptions, and non-convergence. Objective: To develop and validate DIAPINN, a physics-informed neural network (PINN) framework capable of calculating intrinsic diastolic properties of the LV from measured instantaneous PV data, combining mechanistic interpretability with machine learning flexibility. Methods: Instantaneous LV diastolic pressure was modeled as the sum of 1) time-dependent relaxation-related pressure and 2) volume-dependent recoil and stiffness-related pressures. DIAPINN was trained using time, LV pressure and volume as inputs, enforcing data fidelity, model consistency, and physiological plausibility within the loss function. Performance was evaluated in 4,000 Monte Carlo simulations of LV PVloops, and in clinical data from 59 patients who underwent catheterization (39 with heart failure and normal ejection fraction and 20 controls). DIAPINN derived indices were compared to those obtained from a previously validated global optimization method (GOM). Results: On the simulation data, DIA-PINN accurately recovered all constitutive indices (intraclass correlation coefficients near unity) and improved GOM performance. On the clinical data, diastolic indices derived using DIA-PINN strongly correlated with GOM estimates (R>0.90, p<0.001) but were insensitive to initialization. DIAPINN performed best under vena cava occlusion, as varying preload improved parameter identifiability. Conclusions: When applied to instantaneous pressure volume data, a generalizable PINN framework, DIAPINN, provides an improved method for assessing global intrinsic diastolic properties of cardiac chambers.

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Walking in the Free World: Establishing Normative Trajectories for Ecological Assessment of Robust Gait Variability with Age

Tan, K. Z.; Friganovic, K.; Kim, Y. K.; Frautschi, A.; Gwerder, M.; Tan, K. Y.; Koh, V. J. W.; Malhotra, R.; Chan, A. W.-M.; Matchar, D. B.; Singh, N. B.

2026-03-06 geriatric medicine 10.64898/2026.03.06.26347806
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Gait variability is a critical functional indicator of dynamic balance and neurocognitive decline in health. Its translation into clinical practice is, however, challenged by a lack of age-related normative trajectories and reference values under real-world ecological settings. Furthermore, the conventional metrics used to estimate gait variability (Coefficient of Variation, CV; Standard Deviation, SD) have a fundamental methodological flaw: the inherent sensitivity of conventional metrics to the statistical outliers and environmental noise in real-world walking. In this study, we mitigate this factor by applying a robust statistical framework to quantify gait variability. Analysing a large-scale cohort of community-dwelling older adults (n=2,193), we first demonstrate that free-living gait data follows a heavy-tailed distribution, necessitating the use of robust estimators like the Robust Coefficient of Variation (RCV-MAD) and Median Absolute Deviation (MAD). Leveraging these metrics, we established the normative trajectory and reference values of real-world gait variability across the ageing lifespan, revealing a distinct, age-dependent increase in spatio-temporal fluctuations, indicating a decline in rhythmicity and steadiness with age. We further demonstrated the clinical utility of these robust metrics: RCV-MAD consistently yielded larger effect sizes than conventional CV in discriminating between fallers and non-fallers across all gait parameters. Furthermore, we illustrate the potential of long-term unsupervised monitoring to capture intrinsic variability during real-world walking. Validated for consistency and reliability, this robust framework provides the necessary ecological validity to transform gait variability into a standardised, rapid clinical metric for assessing functional decline at an early timepoint.

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Thyroid Cancer Risk Prediction from Multimodal Datasets Using Large Language Model

Ray, P.

2026-03-06 health informatics 10.64898/2026.03.05.26347766
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Thyroid carcinoma is one of the most prevalent endocrine malignancies worldwide, and accurate preoperative differentiation between benign and malignant thyroid nodules remains clinically challenging. Diagnostic methods that medical practitioners use at present depend on their personal judgment to evaluate both imaging results and separate clinical tests, which creates inconsistency that leads to incorrect medical evaluations. The combination of radiological imaging with clinical information systems enables healthcare providers to enhance their capacity to make reliable predictions about patient outcomes while improving their decision-making abilities. The study introduces a deep learning framework that utilizes multiple data sources by combining magnetic resonance imaging (MRI) data with clinical text to predict thyroid cancer. The system uses a Vision Transformer (ViT) to obtain advanced MRI scan features, while a domain-adapted language model processes clinical documents that contain patient medical history and symptoms and laboratory results. The cross-modal attention system enables the system to merge imaging data with textual information from different sources, which helps to identify how the two types of data are interconnected. The system uses a classification layer to classify the fused features, which allows it to determine the probability of cancerous tumors. The experimental results show that the proposed multimodal system achieves better results than the unimodal base systems because it has higher accuracy, sensitivity, specificity, and AUC values, which help medical personnel to make better preoperative decisions.

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Ability to Detect Changes and Minimal Important Difference of Real-World Digital Mobility Outcomes in Proximal Femoral Fracture Patients

Jansen, C.-P.; Braun, J.; Alvarez, P.; Berge, M. A.; Blain, H.; Buekers, J.; Caulfield, B.; Cereatti, A.; Del Din, S.; Garcia-Aymerich, J.; Helbostad, J. L.; Klenk, J.; Koch, S.; Murauer, E.; Polhemus, A.; Rochester, L.; Vereijken, B.; Puhan, M. A.; Becker, C.; Frei, A.

2026-03-06 geriatric medicine 10.64898/2026.03.06.26347770
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Background Older adults' walking has so far been evaluated using standardised assessments of walking capacity within a clinical setting. By taking the evaluation out of the laboratory into the real world, this study provides first evidence of the ability of Digital Mobility Outcomes (DMOs) to detect changes over time and the Minimal Important Difference (MID) in patients after proximal femoral fracture (PFF). This will guide the implementation of DMOs in research and clinical care. Methods For this multicenter prospective cohort study, 381 community-dwelling older adults were included within one year after sustaining a PFF and assessed at two time points, separated by six months. Walking activity and gait DMOs were measured using a single wearable device worn on the lower back for up to seven days. A global impression of change question and three mobility-related outcome measures (Late-Life Function and Disability Instrument; Short Physical Performance Battery; 4m gait speed) were used as anchor variables. To assess each DMOs ability to detect changes, we calculated the standardized mean change as effect size. For estimating MIDs, both distribution-based and anchor-based methods were applied, followed by triangulation by experts if at least three anchor-based estimates were available per DMO, resulting in single-point estimates. Results All three anchor variables demonstrated substantial changes. Overall, 10 out of 24 available DMOs showed large and 7 DMOs moderate positive effects in the expected direction of the respective anchors. Seven DMOs showed no or only small effects. For 12 DMOs, at least three anchor-based estimates were available, enabling MID triangulation. MIDs for walking activity DMOs per day were: a walking duration of 10 minutes, a step count of 1,000 steps, 50 walking bouts (WB), and 15 WBs in WBs over 10 seconds. For gait DMOs, depending on the walking bout length, MIDs for walking speed were between 0.04 m/s and 0.08 m/s, and MIDs for cadence between 4 and 6 steps/minute. Almost all DMOs showed a strong ability to detect improvement in mobility, but rarely in detecting decline. Conclusions For the first time, MIDs are presented for real-world DMOs in PFF patients. These MIDs inform sample size requirements and interpretation of intervention effects for clinical trials, thereby providing guidance and reassurance for clinicians and regulatory bodies.

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Forces Applied on the Glottis During Endotracheal Intubation: Effect of Technique, Stylet, and Experience. A Manikin-based study

Morisson, L.; Latreille, A.; Pietrancosta, M.; Djerroud, K.; Tanoubi, I.; Hemmerling, T.; Laferriere-Langlois, P.

2026-03-06 anesthesia 10.64898/2026.03.05.26347753
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Purpose To quantify and compare the peak force applied on the glottis during endotracheal intubation across five laryngoscopy techniques, two intubation conditions (standard and simulated laryngospasm), and two operator experience levels, and to assess the effects of stylet use and operator anthropometric characteristics on applied force. Methods This prospective, manikin-based experimental study enrolled 50 operators (30 experienced, 20 less experienced). Each performed endotracheal intubation using five techniques: direct laryngoscopy and videolaryngoscopy with a Macintosh blade, each with and without stylet, and videolaryngoscopy with a hyperangulated blade with stylet. A calibrated force sensor positioned at the glottis measured peak forces during standard and simulated laryngospasm conditions. Non-parametric statistical methods were used (Mann-Whitney U, Wilcoxon signed-rank, Friedman tests); effect sizes are reported as rank-biserial correlations. Results Across all techniques, median glottic forces ranged from 4.8 N (IQR: 3.3-6.5) for videolaryngoscopy without stylet to 11.1 N (IQR: 7.5-14.5) for direct laryngoscopy with stylet under standard conditions. No significant differences in applied force were observed between experienced and less experienced operators for any technique-condition combination (all adjusted p = 1.0; |r| < 0.27). Stylet use significantly increased glottic force across all conditions and groups (median increases 3.4-7.3 N; all p < 0.001; rank-biserial r > 0.75). Videolaryngoscopy with a Macintosh blade produced significantly lower forces than hyperangulated videolaryngoscopy under standard conditions (adjusted p = 0.049). Neither grip strength nor hand size correlated with applied force. Conclusion Glottic force during endotracheal intubation is determined primarily by technique and stylet use, not operator experience or anthropometrics. Stylet use is the single largest modifiable contributor to glottic force. These findings have implications for device selection, clinical training, and strategies to minimize airway trauma during intubation.

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The Effects of External Laser Positioning Systems for MRI Simulation on Image Quality and Quantitative MRI Values

McCullum, L.; Ding, Y.; Fuller, C. D.; Taylor, B. A.

2026-03-07 radiology and imaging 10.64898/2026.03.06.26347809
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Background and Purpose: Magnetic resonance imaging (MRI) for radiation therapy treatment planning is currently being used in many anatomical sites to better visualize soft tissue landmarks, a technique known as an MRI simulation. A core component of modern MRI simulation configurations are the use of external laser positioning systems (ELPS) to help set up the patient. Though necessary for accurate and reproducible patient setup, the ELPS, if left on during imaging, may interfere negatively with image quality due to leaking electronic noise, of which MRI is sensitive to. It is currently unknown whether this leakage of electronic noise may further affect quantitative values derived from clinically employed relaxometric, diffusion, and fat fraction sequences. Therefore, in this study, we aim to characterize the impact of MRI simulation lasers on general image quality and quantitative imaging accuracy. Materials and Methods: First, a cine acquisition was used to visualize the real-time changes in image signal-to-noise ratio (SNR) from when the ELPS was deactivated to activated. To validate this effect quantitatively, the SNR was measured using the American College of Radiology (ACR) recommended protocol in a homogeneous phantom with the integrated body, 18-channel UltraFlex small, 18-channel UltraFlex large, 32-channel spine, and 16-channel shoulder coils. Next, a geometric distortion algorithm was tested in two vendor-provided phantoms while using the integrated body coil and the ACR Large Phantom protocol was tested. Finally, a series of quantitative MRI scans were performed using a CaliberMRI Model 137 Mini Hybrid phantom to validate quantitative T1, T2, and ADC while a Calimetrix PDFF-R2* phantom was used for quantitative PDFF and R2*. All scans were performed with both the ELPS both deactivated and activated. Results: Visible electronic noise artifacts were seen when using the integrated body coil when the ELPS was activated on the cine acquisition which led to a four-fold decrease in SNR using the ACR protocol. This SNR drop was not seen when using the remaining tested coils. The automatic fiducial detection algorithm was affected negatively by ELPS activation leading to misidentification when identified perfectly with the ELPS deactivated. Degradation in image intensity uniformity, percent signal ghosting, and low contrast object detectability was seen during ACR Large Phantom testing using the 20-channel Head/Neck coil. Concordance across quantitative MRI values was similar when the ELPS was both deactivated and activated while a consistent increase in standard deviation inside the ADC vials was seen when the ELPS was activated. Discussion: The extra noise induced from the activation of the ELPS during imaging should be avoided due to its potential to unnecessarily increase image noise. This is particularly true when conducting mandatory quality assurance testing for image quality and geometric distortion which utilize the integrated body coil which is most susceptible to ELPS-induced noise. Clear clinical guidelines should be implemented to make this issue known to the MRI technologists, physicists, and other relevant staff using an MRI with a supplementary ELPS for patient alignment.

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Comparison Of Postoperative Pain Severity And Analgesic Consumption Within 24 Hours Between Primary And Repeat Cesarean Sections Under Spinal Anesthesia: A Prospective Cohort Study

Bitewlign, M. Z.; Gemeda, L. A.; Delile, S. T.; Seife, M. A.; Zeleke, M. E.; Gebrewahd, T. H.; Gebreslase, L. G.; Tesfagergse, Y. T.

2026-03-06 anesthesia 10.64898/2026.03.05.26347682
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Background: Cesarean section is one of the most commonly performed surgical procedures worldwide and is frequently associated with moderate to severe postoperative pain. While overall pain after cesarean delivery is well described, evidence comparing pain intensity and analgesic use between primary and repeat cesarean sections remains limited. Objective: To compare postoperative pain severity and total analgesic consumption within the first 24 hours among women undergoing primary versus repeat cesarean sections under spinal anesthesia at Tikur Anbessa Specialized Hospital, Addis Ababa, Ethiopia, from January 1 to March 30, 2025. Methods: A prospective cohort study was conducted among 203 women who underwent cesarean delivery under spinal anesthesia. Participants were selected using systematic random sampling and categorized into primary and repeat cesarean groups. Demographic and clinical characteristics were summarized using descriptive statistics. Group comparisons were performed using independent t-tests or Mann-Whitney U tests for continuous variables and Chi-square tests for categorical variables. A p-value < 0.05 was considered statistically significant. Results: Women undergoing repeat cesarean sections experienced significantly higher postoperative pain. During movement, 92.1% of women in the repeat group reported moderate to severe pain compared with 66.7% in the primary group (p < 0.001). At rest, moderate to severe pain occurred in 74.3% of the repeat group versus 52.9% of the primary group (p = 0.002). Pain scores within the first 6 hours were also higher in the repeat group (median NRS 7, IQR 7-8) than in the primary group (median NRS 5, IQR 4-7; p < 0.001). Total analgesic consumption was significantly greater among women in the repeat group (243.3 {+/-} 98.4 mg) compared with the primary group (146.3 {+/-} 82.5 mg; p < 0.001). Conclusions: Repeat cesarean sections are associated with higher early postoperative pain and increased analgesic requirements. These findings support the need for individualized and intensified pain management strategies for women undergoing repeat cesarean delivery. Clinical trial number : Not applicable

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Lesion-Centric Latent Phenotypes from Segmentation Encoders for Breast Ultrasound Interpretability

Mittal, P.; Singh, D.; Chauhan, J.

2026-03-06 radiology and imaging 10.64898/2026.03.06.26347800
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We propose a lesion-centric phenotype learning pipeline for interpretable breast ultrasound (BUS). Predicted lesion masks are used for mask-weighted pooling of segmentation-encoder latents, producing compact embeddings that suppress background influence; a lightweight calibration step improves cross-dataset consistency. We cluster embeddings to discover latent phenotypes and relate phenotype structure to morphology descriptors (compactness, boundary sharpness). On BUSI and BUS-UCLM with external testing on BUS-BRA, lesion-centric pooling and calibration improve separability and enable strong malignancy probing (AUC 0.982), outperforming radiomics and a standard CNN baseline. A simple rule-gated generator further improves BI-RADS-style descriptor consistency on difficult cases.

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NIR autofluorescence allows for pituitary gland detection during surgery: the first evidence from microscopic studies and in vivo measurements

Shirshin, E.; Alibaeva, V.; Korneva, N.; Grigoriev, A.; Starkov, G.; Budylin, G.; Azizyan, V.; Lapshina, A.; Pachuashvili, N.; Troshina, E.; Mokrysheva, N.; Urusova, L.

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A critical challenge in endocrine neurosurgery is intraoperative discrimination between normal pituitary tissue and pituitary neuroendocrine tumors (PitNETs). Suggesting the universal persistence of near-infrared autofluorescence (NIRAF) in endocrine organs and inspired by routine clinical use of NIRAF for parathyroid gland identification, we discovered that pituitary NIRAF can be employed for label-free transsphenoidal surgery guidance. Ex vivo confocal spectral imaging of 33 specimens identified secretory granules as the dominant long-wavelength fluorescence source and showed that normal pituitary had higher granule content than PitNETs. For the first time, we made use of the pituitary NIRAF during surgery and assessed its performance for pituitary/adenoma separation in vivo for 27 surgeries and showed near-perfect separability between pituitary and non-pituitary measurement sites with ROC-AUC of 0.98. The obtained results clearly demonstrate that the suggested method, based on the solid microscopic background, has the potential for clinical translation and paves the way for enhanced gland preservation during resection.

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Potassium-competitive acid channel blockers versus Proton-Pump inhibitors in the prevention of post-endoscopic peptic ulcer rebleeding: A systematic review and meta-analysis

Tazinkeng, N. N.; FORBES, S.; MCGOWAN, R.; AGUDELO, M.; MAPOUKA, M.; NWATAMOLE, B.; BOATENG, S.; MERIKI, C.-B.; MOHANTY, S.

2026-03-06 gastroenterology 10.64898/2026.03.02.26346403
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Introduction Vonoprazan, a new oral potassium-competitive acid blocker (PCAB), has shown promise in terms of superior acid suppression when compared to Proton pump inhibitors (PPIs). We evaluated the efficacy of PCABs versus PPIs in preventing rebleeding in high-risk peptic ulcer patients after endoscopic hemostasis. Methods Following the Preferred Reporting Items for Systematic Reviews and Meta Analyses (PRISMA) guidelines, we conducted a comprehensive search for relevant studies across Medline, Embase, Web of Science, Cochrane Central Register of Controlled Trials and ClinicalTrials.gov, from inception till March 25, 2025. The primary outcome of interest was peptic ulcer rebleeding rate. Pooled risk ratios (RR) and mean difference (MD) with the corresponding 95% confidence intervals (CIs) were calculated. Results Three studies with 54,410 patients receiving endoscopic hemostasis for peptic ulcer bleeding were included in our analysis. The mean age of included participants was 71 years. There was no significant difference in rebleeding rates between patients receiving PPIs and PCABs (RR 0.827; 95 % CI: 0.5 to 1.3). We observed a significant reduction in length of hospital stay in the PCAB group when compared to the PPI group (MD: -0.44, 95% CI: -0.72 to -0.17), but no significant difference in all-cause mortality between both groups (RR: 0.90, 95% CI: 0.79 to 1.04). Conclusions Our study demonstrates comparable efficacy of PPIs and PCABs in preventing rebleeding in patients with high-risk peptic ulcers after successful endoscopic hemostasis. However, there was a significant reduction in hospital length of stay favoring PCABs. Keywords: Vonoprazan, Proton Pump inhibitors, peptic ulcer bleeding, Endoscopy

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Population differences in wearable device wear time: Rescuing data to address biases and advance health equity

Hurwitz, E.; Connelly, E.; Sklerov, M.; Master, H.; Hochheiser, H.; Butzin-Dozier, Z.; Dunn, J.; Haendel, M. A.

2026-03-06 health informatics 10.64898/2026.03.06.26347799
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Wearable devices present transformative opportunities for personalized healthcare through continuous monitoring of digital biomarkers; however, individual variations in device wear time could mask or otherwise impact signal identification. Despite the widespread adoption of wearable devices in research, no comprehensive framework exists for understanding how wear time varies across populations or for addressing wear time-related biases in analysis. Using Fitbit data from 11,901 participants in the All of Us Research Program, we conducted the first large-scale systematic assessment of wearable device wear time across demographics, social determinants of health, lifestyle factors, mental health symptoms, and disease. Our findings revealed that wear time was higher among males and increased with age, income, and education, but decreased with depressive, anxiety, and anhedonia symptoms, with reductions more pronounced following clinical diagnoses compared to symptom-based classifications. Individuals with chronic conditions displayed differential levels of wear time compared to healthy controls. Critically, we demonstrate that the widely used [&ge;]10-hour daily compliance threshold, while appropriate for some research contexts, can disproportionately exclude days of data from disease populations: among individuals with major depressive disorder, 74.4% of data days were excluded compared to 20.9% for controls. We propose a flexible methodological framework including standard compliance thresholds, wear time covariate adjustment, metric normalization, propensity score matching, and adaptive thresholds that can be applied individually or in combination to optimize wearable data retention across diverse research contexts. These findings establish wear time as a critical methodological consideration for wearable device research and provide guidance for advancing equitable and rigorous digital health analytics.

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Utility of glucose, lipid and kidney function Trajectory Measures for incident Cardiovascular Disease risk prediction for people living with Type 2 Diabetes: a case-study using Danish registry data

Harms, P. P.; Silverman-Retana, O.; Schaarup, J.; Blom, M. T.; Isaksen, A. A.; Witte, D. R.

2026-03-06 cardiovascular medicine 10.64898/2026.03.06.26347493
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Abstract Introduction Cardiovascular disease (CVD) is an important complication of type 2 diabetes (T2D). Current incident CVD-prediction models use single baseline measurements and achieve moderate performance in people with T2D, with C-indices around 0.7. Modern healthcare registries contain repeated measurements of HbA1c, LDL-cholesterol and eGFR, which could carry incremental predictive value. However, the added value of trajectory measures for CVD-risk prediction remains unclear. We aimed to investigate the utility of HbA1c, LDL-cholesterol and eGFR trajectory measures for incident CVD-risk prediction in people with T2D. Methods We studied 83,326 people with T2D from Danish nation-wide registers, who were without a CVD-history at baseline (January 1st 2015), and had [&ge;]2 recorded HbA1c, LDL-cholesterol and eGFR measurements between 2012-2014. Their last measurement was considered as baseline. Across 2012-2014, three types of paired trajectory measures were calculated for each participant (mean & standard deviation (SD), median & interquartile range (IQR), and intercept & slope from a fitted growth model), for HbA1c, LDL-cholesterol, and eGFR, respectively. Reference Cox-regression models for CVD-events (ICD-10 codes assessed prospectively from 2015- 2020) included only baseline measurements (age, sex , age at T2D onset, HbA1c, LDL-cholesterol, HDL-cholesterol, eGFR, and medication use). Next, the paired trajectory measures were sequentially added to the reference model, computing Hazard Ratios, C-indices and Net reclassification index (NRI) with 95% confidence intervals. Lastly, a combined model was fitted. Results At baseline, mean age was 65 (SD{+/-}12), median HbA1c was 48 (mmol/mol, IQR43-56), and 48% were female. During a median 6 years of follow-up 11,280 (14%) people had a CVD-event (ischemic heart disease: 40%; stroke: 32%; heart failure: 24%; CVD-mortality: 5%). Accounting for the reference model, trajectory measures of dispersion and change were associated with CVD-events, with hazard ratios {approx} 1.1 for HbA1c and eGFR, and >1.4 for LDL-cholesterol. Measures centrality did not show an association with CVD events. Addition of trajectory measures produced minimal gains in discrimination (C index {Delta} +0.001-+0.003) but modest improvements in net reclassification (continuous NRI {approx} +3-+9%). Conclusions Trajectory dispersion or change measures for HbA1c, eGFR and especially LDL-cholesterol, easily obtained from routine data, might moderately enhance incident CVD-risk prediction in people with T2D.

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Stability of Microbiome-Derived Fatty Acids in Self-Collected Samples: A Comparative Evaluation of Stool and Blood Matrices

Marsiglia, M. D.; Dei Cas, M.; Bianchi, S.; Borghi, E.

2026-03-06 gastroenterology 10.64898/2026.03.05.26347712
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Background Short-chain fatty acids (SCFAs) are widely used as functional readouts of gut microbial activity in vivo. The growing adoption of decentralised study designs and self-collection protocols has amplified the need for reliable room-temperature storage and shipment strategies. However, SCFAs volatility and the persistence of post-collection microbial metabolism raise concerns regarding pre-analytical stability and the interpretability of measured concentrations. Methods We assessed the temporal stability of fatty acids (FAs) across intestinal and systemic matrices under room-temperature storage. Untreated stool was compared with two nucleic acid stabilisation devices (eNAT and OMNIgene-GUT), while whole blood, plasma and dried blood spots (DBS) were evaluated as minimally invasive systemic sampling strategies. Profiles were quantified using complementary GC-MS and LC-MS/MS workflows. Results Untreated stool showed fermentation-driven increases in major SCFAs, whereas immediate freezing preserved baseline profiles. eNAT maintained faecal FA stability for up to 21 days, while OMNIgene-GUT exhibited baseline and time-dependent alterations. In systemic matrices, plasma and whole blood showed upward drift, whereas DBS declined initially before stabilising after approximately 14 days. Conclusions FA measurements are highly matrix- and device-dependent. Our findings provide practical guidance for the selection of sampling strategies in microbiome-associated FA studies and emphasise the need for controlled pre-analytical conditions in decentralised microbiome studies.

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Echocardiography-Based, Artificial Intelligence-Enabled Electrocardiography (AI-ECG) for Diastolic Hemodynamics Phenotyping in Acute Heart Failure (AHF)

Wong, Y. W.; Abbasi, M.; Lee, E.; Tsaban, G.; Attia, Z. I.; Friedman, P. A.; Noseworthy, P. A.; Lopez-Jimenez, F.; Chen, H. H.; Lin, G.; Scott, L. R.; AbouEzzeddine, O. F.; Oh, J. K.

2026-03-06 cardiovascular medicine 10.64898/2026.03.05.26347763
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Background: Acute heart failure (AHF) exhibits marked heterogeneity in diastolic hemodynamics, yet comprehensive echocardiographic assessment of diastolic function (DF) and filling pressure (FP) is often infeasible. We evaluated whether artificial intelligence-enabled electrocardiography (AI-ECG) could provide scalable DF grading and FP estimation in hospitalized AHF patients. Methods: We retrospectively studied adults hospitalized for AHF across Mayo Clinic sites (2013-2023) who received 1 dose of intravenous loop diuretic and had paired 12-lead ECG and TTE. The previously validated AI-ECG DF model was applied without retraining to generate four DF grades and a continuous FP probability. Clinical outcomes were all-cause mortality and heart failure rehospitalization. Associations with clinical severity markers and echocardiographic indices were examined. Kaplan-Meier survival analysis and adjusted multivariable Cox proportional hazards models were performed. Exploratory analyses examine the kinetics of change in FP probability and impact on mortality. Results: Among 11,513 patients (median age 75 years, 39% female), AI-ECG DF grading was feasible in 100%, whereas echocardiographic DF was indeterminate in 44% of clinically eligible patients. In 2,582 patients with determinate echocardiographic DF, AI-ECG FP probability discriminated TTE Grade 2-3 dysfunction with AUC 0.85 (95% CI 0.83 - 0.86). Higher AI-ECG DF grades were associated with higher comorbidity burden, worse NYHA class, elevated NT-proBNP, higher MAGGIC scores, elevated PCWP, and more advanced structural remodeling. After multivariable adjustment, AI-ECG DF remained independently associated with mortality (hazard ratio [HR] 1.25, 95% CI 1.16-1.35 for Grade 2; HR 1.44, 95% CI 1.33-1.56 for Grade 3 versus Normal/Grade 1). Combining AI-ECG DF with MAGGIC scores yielded ordered risk gradients, with highest mortality in patients with both high MAGGIC and Grade 2-3 DF. Among patients with serial ECGs, improvement in FP probability was independently associated with lower mortality (HR 0.85, 95% CI 0.79-0.91), whereas worsening did not show a consistent adverse gradient beyond baseline DF. Conclusions: In a large, geographically diverse AHF cohort, AI-ECG DF grading was universally feasible, correlated with established hemodynamic severity markers, and provided independent prognostic information beyond established risk factors, supporting its role as a pragmatic, scalable diastolic biomarker in AHF.

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Digital monitoring and action planning to reach zero-dose and under-immunised children: Leveraging data for targeted immunisation responses

Malik, M. Z.; Mian, N. u.; Memon, Z.; Mirza, M. W.; Rana, U. F.; Alvi, M. A.; Ahmed, W.; Ummad, A.; Ali, A.; Naveed, U.; Malik, K. S.; Chaudhary, M. S.; Waheed, M.; Sattar, A.

2026-03-07 health systems and quality improvement 10.64898/2026.03.03.26346932
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Background Persistent inequities in immunisation coverage, particularly among zero-dose and under-immunised children, continue to challenge Pakistan's Expanded Programme on Immunization. Weak feedback loop, inconsistent data quality, and limited real-time monitoring impede effective decision-making. This Implementation Research was conducted under the MAINSTREAM Initiative funded by Alliance for Health Policy and Systems Research (AHPSR) and supported by the Aga Khan Community Health Services Department and National Institutes of Health Pakistan to design, implement, and evaluate a digital monitoring and action planning tool to strengthen data-driven decision-making within routine immunisation systems. Methodology/Principal Findings A co-creation approach was employed to design a digital monitoring solution through inclusive consultations, key informant interviews, and focus group discussions with EPI Punjab at provincial and district levels. The solution included a customised mobile application for data collection and a Power BI visualisation dashboard to map low-coverage areas, identify drivers of dropouts and zero-dose children, and capture caregivers' information sources to inform targeted communication. The intervention was piloted in 60 households across six clusters of a Union Council of District Lahore. Advanced analytics identified reasons for non-vaccination and missed opportunities, generating tailored recommendations and practical plans for program managers. The analysis assessed acceptability, adoption, fidelity, and perceived scalability through field observations, system use, and stakeholder feedback. The co-developed digital tool enhanced visibility of coverage gaps through UC-level mapping, real-time dashboards, and structured action planning. Pilot testing in Lahore showed strong acceptability, ease of use, fidelity, and adaptability among managers, supervisors, and vaccinators. Scalability and sustainability potential were demonstrated, though barriers included leadership turnover, system fragmentation, workload pressures, and resource constraints. Conclusion The tool demonstrated feasibility to strengthen immunisation equity, accountability, and responsiveness. Co-creation with stakeholders enhanced ownership, operational relevance, and adoption, while complementing existing platforms. Sustainability will depend on effective integration, local ownership, capacity building, and accountability, while scalability requires interoperability, resource commitment, policy support, and alignment with existing workflows.

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Novel Genetic Locus Associated with Resistance to M. tuberculosis Infection: A Multi-Ancestry Genome-Wide Association Study

Gandhi, N. R.; Fernandes Gyorfy, M.; Paradkar, M.; Jennet Mofokeng, N.; Figueiredo, M. C.; Prakash, S.; Prudhula Devalraju, K.; Hui, Q.; Willis, F.; Mave, V.; Andrade, B. B.; Moloantoa, T.; Kumar Neela, V. S.; Campbell, A.; Liu, C.; Young, A.; Cordeiro-Santos, M.; Gaikwad, S.; Karyakarte, R. P.; Rolla, V. C.; Kritski, A. L.; Collins, J. M.; Shah, N. S.; Brust, J. C. M.; Lakshmi Valluri, V.; Sarkar, S.; Sterling, T. R.; Martinson, N. A.; Gupta, A.; Sun, Y. V.

2026-03-07 infectious diseases 10.64898/2026.03.06.26347614
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Understanding host susceptibility to Mycobacterium tuberculosis (Mtb) is critical for the development of new vaccines. Certain individuals "resist" becoming infected with Mtb despite intensive exposure; however, it is unknown whether there is a genetic basis for "resistance" to Mtb infection across populations. Here we conducted a genome-wide association study (GWAS) of resistance to Mtb infection by carefully characterizing exposure to TB patients among 4,058 close contacts in India, Brazil, and South Africa. 476 (12%) "resisters" remained free of Mtb infection despite substantial exposure to highly infectious TB patients. GWAS identified a novel chromosome 13 locus (rs1295104126) associated with resistance across the multi-ancestry meta-analysis. Comparing Mtb-infection to all uninfected contacts, irrespective of exposure, yielded a different locus on chromosome 6 (rs28752534), near the HLA-II region. These findings demonstrate a common genetic basis for resistance to Mtb infection across multi-ancestral cohorts with potential to elucidate novel mechanisms of protection from Mtb infection.

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Assessment of Knowledge for Urinary Tract Infections Among Pregnant Women in Jordan: A Cross-Sectional Study

Alawdat, s.; Hassan, Z. M.

2026-03-07 obstetrics and gynecology 10.64898/2026.03.06.26347768
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Abstract Background: Urinary tract infections (UTIs) are common health issue during pregnancy, often lead to adverse maternal and neonatal outcomes if left untreated, low knowledge contribute to high UTI rates, particularly in resource-limited settings like Jordan. To assess the knowledge levels about UTIs among pregnant women in Jordan and its association with socio-demographic characteristics. Methods: A descriptive cross-sectional study was conducted among 500 pregnant women attending antenatal clinics in four major governmental hospitals across Jordan. Data were collected using a validated questionnaire based on the Theory of Planned Behavior (TPB) comprising 25 questions, including 5 socio-demographic questions and 20 knowledge questions, scores were categorized as "adequate" or "inadequate" based on the median score. Results: Among participants, 51.4% had inadequate knowledge, while 48.6% demonstrated adequate knowledge. Higher knowledge levels were significantly associated with younger age (21-30 years), urban residence, higher education (university and postgraduate), and employment status. Conclusion: The findings highlight a knowledge gap among pregnant women regarding UTIs. Integrating targeted health education and addressing socio-demographic disparities into antenatal care, especially for women with low education and rural residence, may improve maternal outcomes. Keywords: Urinary tract infection, Knowledge, Pregnancy, Antenatal care, Jordan, Maternal health.

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Preparing for the Future: A Mixed Methods Study Protocol on AI Awareness and Educational Integration in Qatars Primary Health Care Workforce.

Syed, M. A.; Alnuaimi, A. S.; El Kaissi, D. B.; Syed, M. A.

2026-03-07 health systems and quality improvement 10.64898/2026.03.06.26347773
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Background Artificial intelligence (AI) is increasingly being integrated into healthcare systems, with growing applications in clinical decision support, workflow optimization, and population health management. While substantial investments have been made in digital infrastructure, the successful adoption of AI in primary care depends critically on the readiness, awareness, and educational preparedness of healthcare professionals. Global health authorities emphasize the need for ethically grounded and workforce-focused approaches to AI integration; however, evidence on clinicians readiness for AI, particularly in primary care settings and in the Middle East region, remains limited. Objectives This study aims to assess the level of awareness, perceptions, attitudes, and educational needs related to AI among healthcare professionals working within Qatars Primary Health Care Corporation (PHCC). In addition, it seeks to examine organizational factors influencing the integration of AI-focused education in primary care and to develop an AI readiness framework that can inform targeted training strategies and policy planning. Methods This study will adopt a mixed-methods design guided by the Organizational Readiness for Change (ORC) framework, adapted for AI integration in primary care. The quantitative component will consist of an anonymous, census-style online survey distributed to all healthcare professionals across PHCC health centers and headquarters, assessing AI awareness, attitudes, training needs, and perceived infrastructure readiness. Composite AI awareness and attitude scores will be calculated, and regression analyses will be used to explore factors associated with AI readiness. The qualitative component will include semi-structured interviews and focus group discussions using maximum variation sampling to capture diverse professional perspectives. Qualitative data will be analyzed thematically, following COREQ and SRQR reporting standards. Quantitative and qualitative findings will be integrated to generate an AI readiness profile and an actionable education roadmap aligned with national digital health priorities. Discussion This study will provide the first comprehensive assessment of AI readiness among primary care healthcare professionals in Qatar. By identifying knowledge gaps, training priorities, and organizational enablers and barriers, the findings are expected to inform the development of evidence-based AI education strategies within continuing professional development frameworks. The proposed AI readiness framework may also offer a transferable model for other health systems seeking to align workforce development with responsible AI implementation in primary care.

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Quadriceps Strength And Knee Abduction Moment During Landing In Adolescent Athletes

Johnson, L. R.; Bond, C. W.; Noonan, B. C.

2026-03-06 sports medicine 10.64898/2026.03.06.26347192
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Background: Quadriceps weakness may reduce sagittal plane shock absorption during landing, shifting load toward the frontal plane and increasing knee abduction moment (KAM), a biomechanical risk factor for anterior cruciate ligament (ACL) injuries. Purpose: The purpose of this study was to evaluate the association between isokinetic quadriceps strength and peak KAM during drop vertical jump landing in adolescent athletes. Study Design: Secondary analysis of previously collected data. Methods: Healthy adolescent athletes completed quadriceps strength testing using an isokinetic dynamometer and a biomechanical assessment during a drop vertical jump task. Quadriceps strength was quantified as peak concentric torque and the peak external KAM was calculated during the landing phase on the dominant limb. Both strength and KAM were normalized to body mass. Linear regression was used to examine the association between normalized quadriceps strength and peak external KAM on the dominant limb. Results: The association between quadriceps strength and peak normalized KAM on the dominant limb was not statistically significant ({beta} = -0.053 (95% CI [-0.137 to 0.030]), F(1,119) = 1.62, R2 = 0.013, p = 0.206). Quadriceps strength explained only 1.3% of the variance in peak KAM, indicating a negligible association between these variables in this cohort. Discussion: Quadriceps strength was not associated with peak normalized KAM during landing, suggesting that frontal-plane knee loading during a drop vertical jump is not meaningfully explained by maximal concentric quadriceps strength alone. KAM appears to be driven more by multi-joint movement strategy and neuromuscular coordination than by the capacity of a single muscle group.

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Psychological Readiness Following Anterior Cruciate Ligament Injury And Reinjury In Adolescents And Young Adults: A Retrospective Cohort Study In Sports Physical Therapy Clinics

Moser, J. D.; Bond, C. W.; Noonan, B. C.

2026-03-06 sports medicine 10.64898/2026.03.06.26347203
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Objectives: Compare Anterior Cruciate Ligament (ACL) Return to Sport after Injury (ACL-RSI) scores over time following ACL reconstruction (ACLR) between male and female patients aged 15 to 25 years with primary ACL injuries and ACL reinjuries. Design: Retrospective cohort design. Setting: Sports physical therapy clinics. Participants: 332 patients aged 15-25 years who underwent ACLR following either primary ACL injury or ACL reinjury, either contralateral or ipsilateral graft reinjury, and had at least one observation of the ACL-RSI. Main Outcome Measures: ACL-RSI score. Results: ACL-RSI scores significantly increased over time post- ACLR (p < .001), males reported significantly higher scores compared to females (p < .001), and patients with contralateral ACL reinjury demonstrated higher scores than those with ipsilateral ACL graft reinjury (p = .006), though there was no difference in scores between patients with primary ACL injury and ACL reinjury. A significant interaction effect of sex and injury status was also observed (p = .009), generally demonstrating that females had lower psychological readiness compared to males across injury statuses. Conclusions: ACL-RSI following ACLR varies based on biological sex and time post-ACLR, though ACL reinjury, independent of the reinjured leg, does not appear to effect scores compared to primary ACL injury.